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  5. Sopen07g028470

Sopen07g028470


Description : GH3 auxin-responsive promoter


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g028470
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
At2g47750 No alias Putative indole-3-acetic acid-amido synthetase GH3.9... 0.03 Orthogroups_2024-Update
Brara.B00485.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I00224.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
Brara.I05217.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.12G108900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G284600 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.16G026900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
LOC_Os11g08340 No alias OsGH3.12 - Probable indole-3-acetic acid-amido... 0.02 Orthogroups_2024-Update
MA_16777g0010 No alias (at1g28130 : 670.0) encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00011575-RA No alias (at2g14960 : 234.0) encodes a protein similar to... 0.02 Orthogroups_2024-Update
Sobic.009G187700.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Solyc07g053030 No alias GH3 family protein (AHRD V3.3 *** A0A0K9NRD8_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc10g006630 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT5G54510.1) 0.03 Orthogroups_2024-Update
Solyc10g009640 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.02 Orthogroups_2024-Update
Solyc10g011660 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update
Sopen10g004340 No alias GH3 auxin-responsive promoter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004993 GH3 18 421
No external refs found!