Sopen07g030180

Description : Ribosomal protein L4/L1 family

Gene families : OG_42_0008241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g030180
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06259	No alias	50s ribosomal protein l4, chloroplastic	0.03	Orthogroups_2024-Update
Bradi1g67170	No alias	ribosomal protein L4	0.07	Orthogroups_2024-Update
Brara.J00510.1	No alias	component *(uL4c) of large plastid ribosomal-subunit proteome	0.09	Orthogroups_2024-Update
Cre11.g479500	No alias	ribosomal protein L4	0.11	Orthogroups_2024-Update
Glyma.03G110100	No alias	ribosomal protein L4	0.02	Orthogroups_2024-Update
HORVU4Hr1G060970.1	No alias	component *(uL4c) of large plastid ribosomal-subunit proteome	0.12	Orthogroups_2024-Update
Kfl00160_0190	kfl00160_0190_v1.1	(o80361\|rk4_tobac : 221.0) 50S ribosomal protein L4,...	0.04	Orthogroups_2024-Update
Mp1g18940.1	No alias	component psRPL4 of large ribosomal subunit proteome	0.03	Orthogroups_2024-Update
Potri.006G221100	No alias	ribosomal protein L4	0.09	Orthogroups_2024-Update
Pp1s134_66V6	No alias	50s ribosomal protein l4	0.07	Orthogroups_2024-Update
Pp1s196_122V6	No alias	50s ribosomal protein l4	0.03	Orthogroups_2024-Update
Seita.9G457200.1	No alias	component *(uL4c) of large plastid ribosomal-subunit proteome	0.1	Orthogroups_2024-Update
Sobic.001G427000.1	No alias	component *(uL4c) of large plastid ribosomal-subunit proteome	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002136	Ribosomal_L4/L1e	79	258

External Links

No external refs found!

Sopen07g030180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation