Solyc02g080200

Description : Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC)

Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g080200
Cluster	HCCA clusters: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Glyma.03G234100	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Orthogroups_2024-Update
MA_177599g0010	No alias	(at5g53370 : 494.0) pectin methylesterase PCR fragment F...	0.05	Orthogroups_2024-Update
PSME_00038239-RA	No alias	(at3g49220 : 547.0) Plant invertase/pectin...	0.03	Orthogroups_2024-Update
Potri.001G162400	No alias	pectin methylesterase 3	0.03	Orthogroups_2024-Update
Potri.010G109400	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	Orthogroups_2024-Update
Potri.015G127700	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
Solyc02g080220	No alias	Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC)	0.03	Orthogroups_2024-Update
Solyc07g064180	No alias	pectin methylesterase 2	0.03	Orthogroups_2024-Update
Sopen06g011070	No alias	Pectinesterase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	53	195
IPR006501	Pectinesterase_inhib_dom	582	724
IPR000070	Pectinesterase_cat	764	1053
IPR000070	Pectinesterase_cat	235	531

External Links

No external refs found!