1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g080210

Solyc02g080210


Description : Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g080210
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
154356 No alias methylesterase PCR A 0.02 Orthogroups_2024-Update
A4A49_03834 No alias putative pectinesterasepectinesterase inhibitor 61 0.03 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.04 Orthogroups_2024-Update
At2g43050 No alias Probable pectinesterase/pectinesterase inhibitor 16... 0.02 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.02 Orthogroups_2024-Update
At5g51490 No alias Probable pectinesterase/pectinesterase inhibitor 59... 0.04 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.E00487.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F01763.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.F02072.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I05209.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.09G077100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.13G115300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
HORVU3Hr1G077630.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_177599g0010 No alias (at5g53370 : 494.0) pectin methylesterase PCR fragment F... 0.02 Orthogroups_2024-Update
PSME_00022513-RA No alias (p83948|pme3_citsi : 479.0) Pectinesterase-3 precursor... 0.02 Orthogroups_2024-Update
PSME_00025865-RA No alias (at5g53370 : 368.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
PSME_00043968-RA No alias (at1g53830 : 499.0) encodes a pectin methylesterase;... 0.01 Orthogroups_2024-Update
Potri.001G162400 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.003G072800 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Sopen06g018010 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 53 195
IPR000070 Pectinesterase_cat 235 531
No external refs found!