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  5. Solyc02g080220

Solyc02g080220


Description : Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g080220
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
101118 No alias pectin methylesterase PCR fragment F 0.02 Orthogroups_2024-Update
A4A49_16804 No alias putative pectinesterasepectinesterase inhibitor 12 0.03 Orthogroups_2024-Update
A4A49_25208 No alias pectinesterasepectinesterase inhibitor u1 0.04 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.03 Orthogroups_2024-Update
A4A49_41442 No alias pectinesterase 2 0.04 Orthogroups_2024-Update
At1g53830 No alias Pectinesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42534] 0.04 Orthogroups_2024-Update
At3g27980 No alias Probable pectinesterase 30... 0.03 Orthogroups_2024-Update
Bradi1g16780 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Bradi1g17940 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Bradi2g11860 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Brara.D02605.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.E00487.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E01531.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I05209.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.05 Orthogroups_2024-Update
GRMZM2G043415 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.04G236200 No alias pectin methylesterase PCR fragment F 0.03 Orthogroups_2024-Update
Glyma.06G319100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
LOC_Os01g13320 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g18860 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433178g0010 No alias (at3g49220 : 403.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_130858g0010 No alias (at5g53370 : 416.0) pectin methylesterase PCR fragment F... 0.02 Orthogroups_2024-Update
MA_177599g0010 No alias (at5g53370 : 494.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
MA_2017g0010 No alias (at5g53370 : 505.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
MA_8928694g0010 No alias (at3g43270 : 214.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
PSME_00025865-RA No alias (at5g53370 : 368.0) pectin methylesterase PCR fragment F... 0.02 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00043969-RA No alias (at1g53830 : 497.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.002G145700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.003G072800 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.005G022900 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.006G134700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.03 Orthogroups_2024-Update
Potri.018G051400 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Seita.5G022500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.9G434800.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G005400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Sobic.006G105500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.007G146300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc02g080200 No alias Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g036780 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen02g024920 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen06g003960 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen07g006400 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 237 533
IPR006501 Pectinesterase_inhib_dom 55 197
No external refs found!