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  5. Solyc02g080280

Solyc02g080280


Description : LOW QUALITY:NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (AHRD V3.3 *-* NU1C_SOLLC)


Gene families : OG_42_0005136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g080280
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
137854 No alias NADH dehydrogenase family protein 0.03 Orthogroups_2024-Update
Bradi1g46654 No alias NADH dehydrogenase family protein 0.06 Orthogroups_2024-Update
Bradi2g03103 No alias NADH dehydrogenase family protein 0.03 Orthogroups_2024-Update
Bradi3g27264 No alias NADH dehydrogenase family protein 0.05 Orthogroups_2024-Update
GRMZM2G700478 No alias NADH dehydrogenase family protein 0.05 Orthogroups_2024-Update
LOC_Os10g21396 No alias NADPH-dependent oxidoreductase, putative, expressed 0.05 Orthogroups_2024-Update
Seita.J016400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001694 NADH_UbQ_OxRdtase_su1/FPO 1 150
No external refs found!