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  5. Sopen07g031970

Sopen07g031970


Description : GH3 auxin-responsive promoter


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g031970
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_17823 No alias putative indole-3-acetic acid-amido synthetase gh3.1 0.04 Orthogroups_2024-Update
A4A49_23173 No alias jasmonic acid-amido synthetase jar1 0.02 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
A4A49_40281 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
At2g14960 No alias Probable indole-3-acetic acid-amido synthetase GH3.1... 0.03 Orthogroups_2024-Update
At2g47750 No alias Putative indole-3-acetic acid-amido synthetase GH3.9... 0.03 Orthogroups_2024-Update
At5g13360 No alias Auxin-responsive GH3 family protein... 0.05 Orthogroups_2024-Update
At5g54510 No alias GH3.6 [Source:UniProtKB/TrEMBL;Acc:A0A178UBG0] 0.02 Orthogroups_2024-Update
Bradi2g07227 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Brara.C01348.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Brara.D02794.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
Brara.F00701.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G001421 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.05G101300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.11G051600 No alias Auxin-responsive GH3 family protein 0.07 Orthogroups_2024-Update
PSME_00011575-RA No alias (at2g14960 : 234.0) encodes a protein similar to... 0.04 Orthogroups_2024-Update
PSME_00035248-RA No alias (at2g14960 : 227.0) encodes a protein similar to... 0.02 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00049249-RA No alias (at5g54510 : 889.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
PSME_00056585-RA No alias (q6i581|gh35_orysa : 348.0) Probable indole-3-acetic... 0.02 Orthogroups_2024-Update
Potri.001G410400 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Potri.002G168200 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Seita.5G342900.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Solyc02g092820 No alias IAA-amido synthetase 3-4 0.03 Orthogroups_2024-Update
Solyc07g063850 No alias IAA-amido synthetase 3-9 0.03 Orthogroups_2024-Update
Solyc08g068490 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2) 0.04 Orthogroups_2024-Update
Solyc10g011660 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004993 GH3 21 573
No external refs found!