Sopen07g033020

Description : Alpha amylase, C-terminal all-beta domain

Gene families : OG_42_0001294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g033020
Cluster	HCCA clusters: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g41970	No alias	Alpha amylase family protein	0.05	Orthogroups_2024-Update
Brara.E02162.1	No alias	starch branching enzyme & EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Glyma.18G092600	No alias	Alpha amylase family protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G072500.34	No alias	EC_2.4 glycosyltransferase & starch branching enzyme	0.02	Orthogroups_2024-Update
Kfl00167_0090	kfl00167_0090_v1.1	(at5g03650 : 1167.0) Encodes starch branching enzyme...	0.02	Orthogroups_2024-Update
PSME_00024264-RA	No alias	(p30924\|glgb_soltu : 704.0) 1,4-alpha-glucan branching...	0.03	Orthogroups_2024-Update
Pp1s200_23V6	No alias	starch branching enzyme ii	0.03	Orthogroups_2024-Update
Seita.4G152500.1	No alias	starch branching enzyme & EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Solyc07g064830	No alias	Starch branching enzyme III (AHRD V3.3 *** I0B8P4_WHEAT)	0.09	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	IEA	InterProScan predictions
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006048	A-amylase/branching_C	805	897
IPR004193	Glyco_hydro_13_N	126	188
IPR006047	Glyco_hydro_13_cat_dom	427	500

External Links

No external refs found!