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Sopen07g033290


Description : Calponin homology (CH) domain


Gene families : OG_42_0001020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g033290
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_09912 No alias fimbrin-1 0.03 Orthogroups_2024-Update
Pp1s271_37V6 No alias F10M23.40; fimbrin-like protein (FIM1) [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s314_45V6 No alias F10M23.40; fimbrin-like protein (FIM1) [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.004G259000.1 No alias fimbrin actin-crosslinking factor 0.03 Orthogroups_2024-Update
evm.model.tig00000157.96 No alias (at2g04750 : 160.0) Actin binding Calponin homology (CH)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001715 CH-domain 516 616
IPR001715 CH-domain 267 367
IPR001715 CH-domain 393 495
IPR001715 CH-domain 152 235
No external refs found!