1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen07g033560

Sopen07g033560


Description : Pectinesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g033560
Cluster HCCA clusters: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
A4A49_15905 No alias putative pectinesterase 8 0.04 Orthogroups_2024-Update
A4A49_38924 No alias putative pectinesterase 53 0.04 Orthogroups_2024-Update
At1g05310 No alias Probable pectinesterase 8... 0.02 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.03 Orthogroups_2024-Update
At2g47280 No alias Probable pectinesterase 66... 0.02 Orthogroups_2024-Update
Bradi2g19420 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g17880 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00879.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.10G010501 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G014500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
MA_10428625g0010 No alias (at3g29090 : 374.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
Mp5g03920.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Mp5g03930.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00033773-RA No alias (at2g36710 : 272.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00045911-RA No alias (at5g19730 : 469.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.004G156300 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
Potri.006G134800 No alias pectin methylesterase 1 0.02 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G027700.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc07g043240 No alias Pectinesterase (AHRD V3.3 *** K4CEI4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc12g098340 No alias Pectinesterase (AHRD V3.3 *** K4DHK8_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 56 301
No external refs found!