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  5. Solyc02g080570

Solyc02g080570


Description : Soluble starch synthase 3, chloroplastic/amyloplastic (AHRD V3.3 *** SSY3_SOLTU)


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc02g080570
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G121612 No alias starch synthase 3 0.03 Orthogroups_2024-Update
Mp1g23570.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Orthogroups_2024-Update
Mp2g20000.1 No alias starch synthase (SSIII) 0.02 Orthogroups_2024-Update
Pp1s302_51V6 No alias soluble starch synthase iv-1 0.02 Orthogroups_2024-Update
Sobic.006G221000.1 No alias starch synthase *(SS3) 0.02 Orthogroups_2024-Update
Sopen02g025270 No alias Carbohydrate binding domain (family 25) 0.06 Orthogroups_2024-Update
evm.model.tig00020746.8 No alias (at4g18240 : 154.0) starch synthase 4 (SS4); FUNCTIONS... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR005085 CBM25 685 770
IPR005085 CBM25 348 429
IPR005085 CBM25 523 609
IPR001296 Glyco_trans_1 1028 1152
IPR013534 Starch_synth_cat_dom 781 969
No external refs found!