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  5. Sopen07g034580

Sopen07g034580


Description : WD domain, G-beta repeat


Gene families : OG_42_0003452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g034580
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
166499 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
At2g18900 No alias Transducin/WD40 repeat-like superfamily protein... 0.05 Orthogroups_2024-Update
Bradi4g02100 No alias Transducin/WD40 repeat-like superfamily protein 0.18 Orthogroups_2024-Update
Brara.G00137.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Cre04.g215350 No alias Transducin/WD40 repeat-like superfamily protein 0.13 Orthogroups_2024-Update
Glyma.13G097400 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G062200 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
HORVU5Hr1G011850.3 No alias Unknown function 0.09 Orthogroups_2024-Update
Kfl00057_0170 kfl00057_0170_v1.1 (at2g18900 : 324.0) Transducin/WD40 repeat-like... 0.12 Orthogroups_2024-Update
Pp1s207_6V6 No alias F19F24.10; transducin family protein / WD-40 repeat... 0.09 Orthogroups_2024-Update
Seita.3G384700.1 No alias Unknown function 0.16 Orthogroups_2024-Update
Sobic.008G163500.1 No alias Unknown function 0.18 Orthogroups_2024-Update
Solyc07g066410 No alias Transducin/WD-like repeat-protein (AHRD V3.3 *** G7JUE1_MEDTR) 0.2 Orthogroups_2024-Update
evm.model.contig_2673.3 No alias (at2g18900 : 111.0) Transducin/WD40 repeat-like... 0.09 Orthogroups_2024-Update
evm.model.tig00020554.131 No alias (at3g26480 : 124.0) Transducin family protein / WD-40... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 41 83
No external refs found!