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  5. Sopen08g001700

Sopen08g001700


Description : Terpene synthase family, metal binding domain


Gene families : OG_42_0001714 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001714_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g001700
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
402349 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.05 Orthogroups_2024-Update
Bradi5g21383 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Mp3g13150.1 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.02 Orthogroups_2024-Update
Seita.3G313700.1 No alias ent-kaurene synthase & EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.006G211400.1 No alias EC_4.2 carbon-oxygen lyase & ent-kaurene synthase 0.03 Orthogroups_2024-Update
Solyc08g005640 No alias Terpene synthase (AHRD V3.3 *** G5CV51_SOLLC) 0.09 Orthogroups_2024-Update
Solyc08g005720 No alias Terpene synthase 18 (AHRD V3.3 *-* R9R6F3_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 457 718
IPR001906 Terpene_synth_N 216 415
No external refs found!