Sopen08g002170

Description : B3 DNA binding domain

Gene families : OG_42_0001059 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001059_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g002170
Cluster	HCCA clusters: Cluster_316

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32427	No alias	b3 domain-containing protein rem10	0.04	Orthogroups_2024-Update
Brara.B03908.1	No alias	REM-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E02965.1	No alias	REM-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01337.1	No alias	REM-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04459.1	No alias	REM-type transcription factor	0.04	Orthogroups_2024-Update
Solyc08g006270	No alias	No description available	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	267	353
IPR003340	B3_DNA-bd	18	95
IPR003340	B3_DNA-bd	145	222

External Links

No external refs found!