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  5. Sopen08g002510

Sopen08g002510


Description : PRONE (Plant-specific Rop nucleotide exchanger)


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g002510
Cluster HCCA clusters: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
At3g55660 No alias Rop guanine nucleotide exchange factor 6... 0.06 Orthogroups_2024-Update
At4g13240 No alias Rop guanine nucleotide exchange factor 9... 0.02 Orthogroups_2024-Update
Brara.I03817.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.12 Orthogroups_2024-Update
Brara.J02620.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.05 Orthogroups_2024-Update
Glyma.14G064000 No alias ROP guanine nucleotide exchange factor 5 0.14 Orthogroups_2024-Update
Glyma.18G232800 No alias RHO guanyl-nucleotide exchange factor 3 0.05 Orthogroups_2024-Update
HORVU1Hr1G072910.3 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update
LOC_Os09g37270 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.02 Orthogroups_2024-Update
MA_66695g0010 No alias (at5g02010 : 540.0) Encodes a member of KPP-like gene... 0.02 Orthogroups_2024-Update
Potri.006G092600 No alias RHO guanyl-nucleotide exchange factor 7 0.03 Orthogroups_2024-Update
Seita.3G148800.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.04 Orthogroups_2024-Update
Sobic.003G356600.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Solyc08g006550 No alias Rop guanine nucleotide exchange factor, putative (AHRD... 0.11 Orthogroups_2024-Update
evm.model.contig_2063.2 No alias (at4g38430 : 92.8) Member of the RopGEF (guanine... 0.05 Orthogroups_2024-Update
evm.model.contig_2063.3 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005512 PRONE_dom 62 429
No external refs found!