Sopen08g003110

Description : EF-hand domain pair

Gene families : OG_42_0000326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g003110
Cluster	HCCA clusters: Cluster_393

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g18740	No alias	Calcium-binding EF-hand family protein	0.02	Orthogroups_2024-Update
Glyma.04G235900	No alias	Calcium-binding EF-hand family protein	0.03	Orthogroups_2024-Update
LOC_Os02g18880	No alias	calcineurin B, putative, expressed	0.02	Orthogroups_2024-Update
Seita.3G375800.1	No alias	calcium sensor *(CBL)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000261	EH_dom	32	101
IPR002048	EF_hand_dom	109	176

External Links

No external refs found!