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  5. Sopen08g003710

Sopen08g003710


Description : Rare lipoprotein A (RlpA)-like double-psi beta-barrel


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g003710
Cluster HCCA clusters: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
231226 No alias expansin A9 0.02 Orthogroups_2024-Update
409954 No alias expansin A8 0.02 Orthogroups_2024-Update
91129 No alias expansin A15 0.02 Orthogroups_2024-Update
At5g39270 No alias Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80] 0.03 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.02 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g22180.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00000910-RA No alias (at5g05290 : 323.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Potri.013G060800 No alias expansin A15 0.02 Orthogroups_2024-Update
Seita.7G029300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 77 161
IPR007117 Expansin_CBD 172 250
No external refs found!