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  5. Sopen08g004350

Sopen08g004350


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g004350
Cluster HCCA clusters: Cluster_386

Target Alias Description ECC score Gene Family Method Actions
A4A49_12086 No alias cyclic dof factor 2 0.03 Orthogroups_2024-Update
At2g34140 No alias Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] 0.03 Orthogroups_2024-Update
Bradi1g26570 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Brara.D00980.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I02909.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.12G072400 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.18G289700 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G005390.2 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
HORVU4Hr1G059590.2 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
PSME_00041316-RA No alias (at5g39660 : 139.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.003G034200 No alias DOF zinc finger protein 1 0.02 Orthogroups_2024-Update
Potri.004G056900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Pp1s124_139V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.1G290700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G206300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.003G253200.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.007G223200.2 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g015430 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen02g021750 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 26 81
No external refs found!