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  5. Sopen08g006220

Sopen08g006220


Description : Putative tRNA binding domain


Gene families : OG_42_0002556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g006220
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Brara.I04133.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre01.g046652 No alias Nucleic acid-binding, OB-fold-like protein 0.02 Orthogroups_2024-Update
Glyma.06G142400 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
Glyma.12G009400 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G066320.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.019G058700 No alias Nucleic acid-binding, OB-fold-like protein 0.05 Orthogroups_2024-Update
Pp1s129_152V6 No alias F24G16.250; tRNA-binding region domain-containing... 0.03 Orthogroups_2024-Update
Sobic.001G010800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc08g015960 No alias Methionyl-tRNA synthetase, putative (AHRD V3.3 *** B9STA0_RICCO) 0.06 Orthogroups_2024-Update
evm.model.contig_628.4 No alias (at4g13780 : 149.0) methionine--tRNA ligase, putative /... 0.02 Orthogroups_2024-Update
evm.model.tig00000553.11 No alias (at4g13780 : 173.0) methionine--tRNA ligase, putative /... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 125 219
No external refs found!