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  5. Sopen08g006540

Sopen08g006540


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g006540
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g01440 No alias retrotransposon protein, putative, Ty1-copia subclass 0.03 Orthogroups_2024-Update
Solyc01g067050 No alias No description available 0.03 Orthogroups_2024-Update
Solyc11g039940 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g028070 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen03g025800 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen05g008430 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen05g019250 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen06g011320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen11g014180 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 346 583
No external refs found!