1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen08g006850

Sopen08g006850


Description : Proteasome subunit


Gene families : OG_42_0003071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g006850
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cre17.g724350 No alias 20S proteasome alpha subunit E1 0.03 Orthogroups_2024-Update
Seita.8G194300.1 No alias alpha-type-5 component *(PAE) of 26S proteasome & EC_3.4... 0.04 Orthogroups_2024-Update
Solyc08g016510 No alias Proteasome subunit alpha type (AHRD V3.3 *** M1AKV3_SOLTU) 0.03 Orthogroups_2024-Update
evm.model.tig00000692.64 No alias (q9lsu1|psa5_orysa : 295.0) Proteasome subunit alpha... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan predictions
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 31 216
No external refs found!