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  5. Sopen08g008190

Sopen08g008190


Description : BRCA1 C Terminus (BRCT) domain


Gene families : OG_42_0000927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g008190
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Brara.H01075.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 Orthogroups_2024-Update
HORVU1Hr1G069020.23 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.02 Orthogroups_2024-Update
Kfl00116_0090 kfl00116_0090_v1.... (at1g04020 : 184.0) Encodes a protein containing two... 0.02 Orthogroups_2024-Update
PSME_00015140-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00028327-RA No alias (at4g21070 : 208.0) Encodes AtBRCA1, an ortholog of the... 0.02 Orthogroups_2024-Update
Seita.3G183600.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 Orthogroups_2024-Update
Sobic.006G144700.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 Orthogroups_2024-Update
Sobic.009G177600.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.02 Orthogroups_2024-Update
Sobic.009G192700.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 Orthogroups_2024-Update
Solyc06g008210 No alias breast cancer associated RING 1 (AHRD V3.3 *** AT1G04020.1) 0.03 Orthogroups_2024-Update
Solyc08g023280 No alias RING/U-box superfamily protein (AHRD V3.3 --* AT3G07200.3) 0.05 Orthogroups_2024-Update
evm.model.contig_2303.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001357 BRCT_dom 887 998
IPR001357 BRCT_dom 775 851
No external refs found!