1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen08g010020

Sopen08g010020


Description : SNF2 family N-terminal domain


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g010020
Cluster HCCA clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
Brara.J01708.1 No alias ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.04 Orthogroups_2024-Update
LOC_Os05g05780 No alias chromatin-remodeling complex ATPase chain, putative, expressed 0.02 Orthogroups_2024-Update
Solyc01g090650 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 606 719
IPR000330 SNF2_N 304 584
IPR009463 DUF1087 841 902
IPR009462 DUF1086 938 1068
IPR023780 Chromo_domain 193 240
IPR023780 Chromo_domain 102 156
IPR019787 Znf_PHD-finger 54 96
No external refs found!