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  5. Sopen08g012730

Sopen08g012730


Description : Retroviral aspartyl protease


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g012730
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G045770.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G052870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g17292 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g37340 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 95 191
IPR000477 RT_dom 623 781
No external refs found!