Sopen08g013780


Description : Retrotransposon gag protein


Gene families : OG_42_0000495 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g013780

Target Alias Description ECC score Gene Family Method Actions
Solyc07g021690 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g052630 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 204 300
IPR001878 Znf_CCHC 365 381
No external refs found!