Sopen08g014090

Description : Glycosyl hydrolase family 1

Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g014090
Cluster	HCCA clusters: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
A4A49_13128	No alias	beta-glucosidase 12	0.02	Orthogroups_2024-Update
A4A49_36649	No alias	beta-glucosidase 47	0.03	Orthogroups_2024-Update
At2g44460	No alias	Beta-glucosidase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3B3]	0.02	Orthogroups_2024-Update
At5g42260	No alias	Beta-glucosidase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH03]	0.03	Orthogroups_2024-Update
Brara.G00669.1	No alias	EC_3.2 glycosylase	0.02	Orthogroups_2024-Update
Glyma.07G258700	No alias	beta glucosidase 46	0.02	Orthogroups_2024-Update
Glyma.15G031400	No alias	beta glucosidase 15	0.04	Orthogroups_2024-Update
LOC_Os09g31410	No alias	Os9bglu29 - beta-glucosidase homologue, similar to...	0.02	Orthogroups_2024-Update
MA_8849054g0010	No alias	(at1g26560 : 496.0) beta glucosidase 40 (BGLU40);...	0.02	Orthogroups_2024-Update
PSME_00027665-RA	No alias	(at1g02850 : 509.0) beta glucosidase 11 (BGLU11);...	0.02	Orthogroups_2024-Update
Potri.001G409900	No alias	beta glucosidase 41	0.02	Orthogroups_2024-Update
Pp1s76_8V6	No alias	latex cyanogenic beta glucosidase	0.02	Orthogroups_2024-Update
Sobic.006G117400.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Sobic.008G080400.1	No alias	EC_3.2 glycosylase	0.02	Orthogroups_2024-Update
Sobic.008G080600.1	No alias	EC_3.2 glycosylase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025724	GAG-pre-integrase_dom	172	215
IPR001584	Integrase_cat-core	268	320
IPR001360	Glyco_hydro_1	923	1250
IPR013103	RVT_2	545	628

External Links

No external refs found!