Sopen08g015240


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000841 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000841_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g015240
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Sopen08g024310 No alias Reverse transcriptase-like 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026960 RVT-Znf 771 856
IPR002156 RNaseH_domain 1874 1942
IPR002156 RNaseH_domain 980 1081
IPR002156 RNaseH_domain 47 132
IPR000477 RT_dom 260 513
No external refs found!