Description : DNA helicase (AHRD V3.3 *** K4BA88_SOLLC)
Gene families : OG_42_0006875 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006875_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc02g082180 | |
Cluster | HCCA clusters: Cluster_34 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_25314 | No alias | dna replication licensing factor mcm6 | 0.04 | Orthogroups_2024-Update | |
Brara.F03728.1 | No alias | component *(MCM6) of MCM replicative DNA helicase complex | 0.06 | Orthogroups_2024-Update | |
Cre03.g178650 | No alias | minichromosome maintenance (MCM2/3/5) family protein | 0.07 | Orthogroups_2024-Update | |
GRMZM2G021069 | No alias | minichromosome maintenance (MCM2/3/5) family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.09G047300 | No alias | minichromosome maintenance (MCM2/3/5) family protein | 0.1 | Orthogroups_2024-Update | |
Glyma.15G154900 | No alias | minichromosome maintenance (MCM2/3/5) family protein | 0.07 | Orthogroups_2024-Update | |
Kfl00029_0270 | kfl00029_0270_v1.1 | (at5g44635 : 779.0) MINICHROMOSOME MAINTENANCE 6 (MCM6);... | 0.08 | Orthogroups_2024-Update | |
MA_15713g0010 | No alias | (at5g44635 : 1125.0) MINICHROMOSOME MAINTENANCE 6... | 0.03 | Orthogroups_2024-Update | |
Mp4g14930.1 | No alias | component MCM6 of MCM replicative DNA helicase complex | 0.05 | Orthogroups_2024-Update | |
Potri.001G074000 | No alias | minichromosome maintenance (MCM2/3/5) family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s210_36V6 | No alias | minichromosome maintenance protein | 0.03 | Orthogroups_2024-Update | |
Seita.3G082800.1 | No alias | component *(MCM6) of MCM replicative DNA helicase complex | 0.07 | Orthogroups_2024-Update | |
Sobic.009G087000.1 | No alias | component *(MCM6) of MCM replicative DNA helicase complex | 0.14 | Orthogroups_2024-Update | |
Sopen02g026840 | No alias | MCM2/3/5 family | 0.1 | Orthogroups_2024-Update | |
evm.model.contig_429.9 | No alias | (at5g44635 : 608.0) MINICHROMOSOME MAINTENANCE 6 (MCM6);... | 0.05 | Orthogroups_2024-Update | |
evm.model.tig00020918.5 | No alias | (at5g44635 : 634.0) MINICHROMOSOME MAINTENANCE 6 (MCM6);... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
BP | GO:0006260 | DNA replication | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000228 | nuclear chromosome | IEP | Predicted GO |
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
CC | GO:0042555 | MCM complex | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
No external refs found! |