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  5. Sopen08g017470

Sopen08g017470


Description : SWIM zinc finger


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g017470
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Solyc02g092900 No alias No description available 0.02 Orthogroups_2024-Update
Solyc09g014420 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g039300 No alias No description available 0.04 Orthogroups_2024-Update
Sopen03g030620 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen09g021110 No alias MULE transposase domain 0.03 Orthogroups_2024-Update
Sopen12g002860 No alias MuDR family transposase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 449 477
No external refs found!