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  5. Sopen08g018220

Sopen08g018220


Description : DDE superfamily endonuclease


Gene families : OG_42_0000772 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g018220
Cluster HCCA clusters: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
At4g29780 No alias Nuclease [Source:UniProtKB/TrEMBL;Acc:Q84J48] 0.03 Orthogroups_2024-Update
LOC_Os01g09220 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
MA_301324g0010 No alias (at5g12010 : 526.0) unknown protein; INVOLVED IN:... 0.02 Orthogroups_2024-Update
MA_767167g0010 No alias (at3g55350 : 144.0) PIF / Ping-Pong family of plant... 0.05 Orthogroups_2024-Update
Potri.009G100000 No alias Function unknown 0.04 Orthogroups_2024-Update
Solyc07g040960 No alias LOW QUALITY:Harbinger transposase-derived nuclease (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 290 446
No external refs found!