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  5. Sopen08g018430

Sopen08g018430


Description : Elongation factor Tu GTP binding domain


Gene families : OG_42_0001704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001704_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen08g018430
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Bradi3g44160 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.06 Orthogroups_2024-Update
Bradi3g44175 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.06 Orthogroups_2024-Update
Brara.B03590.1 No alias mRNA-translocation factor *(eEF2)) 0.04 Orthogroups_2024-Update
Brara.D02178.1 No alias mRNA-translocation factor *(eEF2)) 0.07 Orthogroups_2024-Update
Brara.H01897.1 No alias mRNA-translocation factor *(eEF2)) 0.07 Orthogroups_2024-Update
Brara.H01898.1 No alias mRNA-translocation factor *(eEF2)) 0.08 Orthogroups_2024-Update
GRMZM2G095851 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 Orthogroups_2024-Update
Glyma.08G170000 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G116710.5 No alias mRNA-translocation factor *(eEF2)) 0.06 Orthogroups_2024-Update
HORVU7Hr1G106150.2 No alias mRNA-translocation factor *(eEF2)) 0.06 Orthogroups_2024-Update
Kfl00080_0090 kfl00080_0090_v1.1 (at1g56070 : 1415.0) encodes a translation elongation... 0.02 Orthogroups_2024-Update
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.02 Orthogroups_2024-Update
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.02 Orthogroups_2024-Update
PSME_00043108-RA No alias (at1g56070 : 1512.0) encodes a translation elongation... 0.04 Orthogroups_2024-Update
Sobic.001G021300.1 No alias mRNA-translocation factor *(eEF2)) 0.09 Orthogroups_2024-Update
Sobic.001G021400.1 No alias mRNA-translocation factor *(eEF2)) 0.08 Orthogroups_2024-Update
Solyc08g062910 No alias Elongation factor 2 (AHRD V3.3 *** EF2_ARATH) 0.1 Orthogroups_2024-Update
Solyc08g062920 No alias elongation factor 2 0.11 Orthogroups_2024-Update
evm.model.contig_2314.1 No alias (o23755|ef2_betvu : 1094.0) Elongation factor 2 (EF-2) -... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 17 342
IPR000640 EFG_V-like 724 811
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR004161 EFTu-like_2 394 467
No external refs found!