Sopen08g018510

Description : HSF-type DNA-binding

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g018510
Cluster	HCCA clusters: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02892	No alias	heat stress transcription factor c-1	0.03	Orthogroups_2024-Update
A4A49_05282	No alias	heat stress transcription factor a-8	0.02	Orthogroups_2024-Update
A4A49_30961	No alias	heat stress transcription factor a-6b	0.04	Orthogroups_2024-Update
AC216247.3_FG001	No alias	heat shock transcription factor B4	0.02	Orthogroups_2024-Update
At4g36990	No alias	Heat stress transcription factor B-1...	0.03	Orthogroups_2024-Update
Brara.A00997.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C02130.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C03890.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C04389.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02032.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.07G086400	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
Glyma.07G235600	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
Glyma.17G174900	No alias	heat shock factor 4	0.02	Orthogroups_2024-Update
HORVU5Hr1G068320.2	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os04g48030	No alias	heat stress transcription factor B-1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28354	No alias	CPuORF39 - conserved peptide uORF-containing transcript,...	0.03	Orthogroups_2024-Update
PSME_00007071-RA	No alias	(at3g22830 : 151.0) member of Heat Stress Transcription...	0.02	Orthogroups_2024-Update
PSME_00053758-RA	No alias	(at5g62020 : 205.0) member of Heat Stress Transcription...	0.02	Orthogroups_2024-Update
Potri.006G049200	No alias	heat shock transcription factor B3	0.03	Orthogroups_2024-Update
Potri.011G071700	No alias	heat shock transcription factor A4A	0.02	Orthogroups_2024-Update
Pp1s19_153V6	No alias	heat shock transcription factor	0.04	Orthogroups_2024-Update
Pp1s207_20V6	No alias	heat shock transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G225300.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc09g082670	No alias	SolycHsfA6a	0.03	Orthogroups_2024-Update
Solyc11g064990	No alias	SolycHsfB4b	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	32	121

External Links

No external refs found!

Sopen08g018510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation