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  5. Sopen08g018810

Sopen08g018810


Description : ZIP Zinc transporter


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g018810
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi3g17900 No alias zinc transporter 1 precursor 0.02 Orthogroups_2024-Update
Cre07.g355100 No alias zinc transporter 3 precursor 0.02 Orthogroups_2024-Update
Cre07.g355150 No alias zinc transporter 5 precursor 0.02 Orthogroups_2024-Update
Seita.6G026600.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
Sobic.007G064900.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
evm.model.contig_643.2 No alias (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003689 ZIP 31 377
No external refs found!