1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g082390

Solyc02g082390


Description : LOW QUALITY:MYB-like transcription factor family protein (AHRD V3.3 *** A0A072USM0_MEDTR)


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g082390
Cluster HCCA clusters: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
At5g61620 No alias Probable transcription factor At5g61620... 0.03 Orthogroups_2024-Update
Bradi2g23710 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03763.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Glyma.13G005900 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G006100 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G229800 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.20G060250 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G019480.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
LOC_Os04g58020 No alias MYB_Al protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G073900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G225500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.003G132300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.01 Orthogroups_2024-Update
Solyc11g006720 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen08g018930 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 162
No external refs found!