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  5. Sopen08g018900

Sopen08g018900


Description : EF-hand domain pair


Gene families : OG_42_0000326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g018900
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Brara.A00491.1 No alias calcium-dependent regulatory protein SCaBP8/CBL10 &... 0.04 Orthogroups_2024-Update
Brara.J01575.1 No alias calcium sensor *(CBL) 0.03 Orthogroups_2024-Update
Glyma.04G235900 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
LOC_Os02g18880 No alias calcineurin B, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s107_63V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G291900.1 No alias calcium sensor *(CBL) 0.05 Orthogroups_2024-Update
Seita.9G164200.1 No alias calcium sensor *(CBL) 0.02 Orthogroups_2024-Update
Solyc08g065330 No alias Calcineurin B, putative (AHRD V3.3 *** B9RRT2_RICCO) 0.03 Orthogroups_2024-Update
Sopen12g007760 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 147 214
IPR002048 EF_hand_dom 89 135
No external refs found!