Sopen08g020390

Description : Ring finger domain

Gene families : OG_42_0004909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004909_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g020390
Cluster	HCCA clusters: Cluster_394

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03794	No alias	hypothetical protein	0.08	Orthogroups_2024-Update
Solyc08g066550	No alias	RING/U-box superfamily protein (AHRD V3.3 --* AT1G35330.1)	0.03	Orthogroups_2024-Update
Solyc11g071190	No alias	Mitogen-activated protein kinase kinase kinase 1 (AHRD...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	60	88
IPR001841	Znf_RING	154	201

External Links

No external refs found!