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  5. Sopen08g021010

Sopen08g021010


Description : PPR repeat family


Gene families : OG_42_0011692 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g021010
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Solyc08g067060 No alias Pentatricopeptide repeat superfamily protein, putative... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 410 430
IPR002885 Pentatricopeptide_repeat 163 191
IPR002885 Pentatricopeptide_repeat 303 331
IPR002885 Pentatricopeptide_repeat 235 262
IPR002885 Pentatricopeptide_repeat 509 557
IPR002885 Pentatricopeptide_repeat 439 482
IPR002885 Pentatricopeptide_repeat 789 835
IPR002885 Pentatricopeptide_repeat 582 628
IPR002885 Pentatricopeptide_repeat 722 767
IPR002885 Pentatricopeptide_repeat 335 383
IPR002885 Pentatricopeptide_repeat 637 695
No external refs found!