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  5. Sopen08g021220

Sopen08g021220


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g021220
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.02 Orthogroups_2024-Update
Bradi1g52440 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g49196 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g34010 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g31030 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.I04047.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02450.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G053210 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G140160 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G043220.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os08g38060 No alias RING finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g04090 No alias zinc finger, C3HC4 type domain containing protein 0.02 Orthogroups_2024-Update
MA_77269g0010 No alias (at3g46620 : 139.0) zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
Potri.001G231000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G083001 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Potri.003G145800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G127600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Seita.7G317600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G211900.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.02 Orthogroups_2024-Update
Sobic.007G224300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen01g004490 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 230 272
No external refs found!