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Description : RNA binding motif
Gene families : OG_42_0002790 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002790_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen08g022160 | |
| Cluster | HCCA clusters: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 168828 | No alias | La protein 1 | 0.02 | Orthogroups_2024-Update | |
| At4g32720 | No alias | La1 [Source:UniProtKB/TrEMBL;Acc:A0A178V700] | 0.02 | Orthogroups_2024-Update | |
| Bradi5g14590 | No alias | La protein 1 | 0.09 | Orthogroups_2024-Update | |
| Brara.A00518.1 | No alias | nascent RNA chaperone *(LA) | 0.03 | Orthogroups_2024-Update | |
| Cre17.g724200 | No alias | RNA recognition motif (RRM)-containing protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G014750 | No alias | La protein 1 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G096705 | No alias | La protein 1 | 0.04 | Orthogroups_2024-Update | |
| Glyma.04G080500 | No alias | La protein 1 | 0.07 | Orthogroups_2024-Update | |
| Glyma.06G082200 | No alias | La protein 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G190500 | No alias | La protein 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G085880.1 | No alias | nascent RNA chaperone *(LA) | 0.07 | Orthogroups_2024-Update | |
| Kfl00003_0530 | kfl00003_0530_v1.1 | (at4g32720 : 156.0) Encodes AtLa1, a member of the... | 0.03 | Orthogroups_2024-Update | |
| Mp1g04820.1 | No alias | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.02 | Orthogroups_2024-Update | |
| Potri.006G241800 | No alias | La protein 1 | 0.03 | Orthogroups_2024-Update | |
| Seita.1G228700.1 | No alias | nascent RNA chaperone *(LA) | 0.03 | Orthogroups_2024-Update | |
| Seita.7G153300.1 | No alias | nascent RNA chaperone *(LA) | 0.06 | Orthogroups_2024-Update | |
| Sobic.006G135000.1 | No alias | nascent RNA chaperone *(LA) | 0.03 | Orthogroups_2024-Update | |
| Solyc08g068310 | No alias | La-like protein (AHRD V3.3 *** W9RMR2_9ROSA) | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |