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  5. Sopen08g022210

Sopen08g022210


Description : VHS domain


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g022210
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Bradi2g07700 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Brara.K00689.1 No alias ubiquitin adaptor protein *(TOL) 0.06 Orthogroups_2024-Update
GRMZM2G023105 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Glyma.05G197500 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
Glyma.13G036000 No alias Target of Myb protein 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 121
IPR004152 GAT_dom 195 269
No external refs found!