Sopen08g024060

Description : ABC-2 type transporter

Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g024060
Cluster	HCCA clusters: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
At1g31770	No alias	ABC transporter G family member 14...	0.03	Orthogroups_2024-Update
At1g71960	No alias	ABC transporter G family member 25...	0.03	Orthogroups_2024-Update
Bradi1g36410	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Brara.F03336.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Brara.J02569.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Glyma.14G012000	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
PSME_00000646-RA	No alias	(at3g13220 : 413.0) Encodes a ATP-binding cassette...	0.02	Orthogroups_2024-Update
PSME_00037831-RA	No alias	(at1g31770 : 730.0) ATP-binding cassette 14 (ABCG14);...	0.02	Orthogroups_2024-Update
Potri.001G370600	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Potri.011G123200	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Pp1s138_50V6	No alias	white-brown-complex abc transporter family	0.02	Orthogroups_2024-Update
Solyc01g006720	No alias	ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR)	0.02	Orthogroups_2024-Update
Solyc07g065770	No alias	ABC transporter family protein (AHRD V3.3 - B9GG01_POPTR)	0.03	Orthogroups_2024-Update
Solyc12g013630	No alias	ABC transporter G family member (AHRD V3.3 *** A0A0K9Q0M2_ZOSMR)	0.02	Orthogroups_2024-Update
evm.model.tig00000692.51	No alias	(at1g51460 : 166.0) ABC-2 type transporter family...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	384	590
IPR003439	ABC_transporter-like	75	225

External Links

No external refs found!