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  5. Sopen08g024300

Sopen08g024300


Description : NB-ARC domain


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g024300
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
A4A49_15893 No alias putative disease resistance protein rga3 0.03 Orthogroups_2024-Update
A4A49_23434 No alias putative disease resistance protein rga3 0.02 Orthogroups_2024-Update
Glyma.09G020700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G134200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G138301 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G126510.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G017940.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G017950.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g10560 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.003G200120 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G015400 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.8G236600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G178700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G157400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g106410 No alias Nbs-lrr resistance protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g006740 No alias Disease resistance protein (AHRD V3.3 *-* Q1RU52_MEDTR) 0.03 Orthogroups_2024-Update
Solyc04g039990 No alias NBS-LRR disease resistance protein (AHRD V3.3 *** C6FF78_SOYBN) 0.04 Orthogroups_2024-Update
Solyc11g069620 No alias Disease resistance protein (AHRD V3.3 *** A0A068EUA9_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 27 66
IPR001611 Leu-rich_rpt 1993 2049
IPR001611 Leu-rich_rpt 1054 1110
IPR001611 Leu-rich_rpt 143 204
IPR002182 NB-ARC 1303 1540
IPR002182 NB-ARC 399 637
No external refs found!