1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g082950

Solyc02g082950


Description : Trichome birefringence-like protein (AHRD V3.3 *** G7JKP3_MEDTR)


Gene families : OG_42_0003177 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g082950
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G047630.1 No alias xylan O-acetyltransferase *(XOAT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 117 406
IPR025846 PMR5_N_dom 63 116
No external refs found!