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  5. Sopen08g024640

Sopen08g024640


Description : NB-ARC domain


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g024640
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
A4A49_23434 No alias putative disease resistance protein rga3 0.03 Orthogroups_2024-Update
Glyma.01G035800 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Glyma.02G030000 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.02G030700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.06G318566 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.13G184800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.13G187900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.13G193300 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.19G134100 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Orthogroups_2024-Update
LOC_Os05g31570 No alias disease resistance protein RGA4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g04090 No alias disease resistance RPP13-like protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g10570 No alias NBS-LRR disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G200500 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.006G275800 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.017G121700 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.017G137851 No alias target of AVRB operation1 0.03 Orthogroups_2024-Update
Seita.8G236600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.J024800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G101000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc11g072000 No alias Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH) 0.03 Orthogroups_2024-Update
Sopen11g029080 No alias Leucine Rich Repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 163 397
No external refs found!