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  5. Sopen08g024660

Sopen08g024660


Description : CobW/HypB/UreG, nucleotide-binding domain


Gene families : OG_42_0001486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g024660
Cluster HCCA clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
106303 No alias Cobalamin biosynthesis CobW-like protein 0.02 Orthogroups_2024-Update
A4A49_06077 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi3g54350 No alias plastid transcriptionally active 17 0.02 Orthogroups_2024-Update
Brara.F01078.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) 0.05 Orthogroups_2024-Update
HORVU6Hr1G086970.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC17) 0.03 Orthogroups_2024-Update
LOC_Os04g51100 No alias COBW domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
Potri.001G133500 No alias plastid transcriptionally active 17 0.05 Orthogroups_2024-Update
Sopen03g036320 No alias CobW/HypB/UreG, nucleotide-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 328 422
IPR003495 CobW/HypB/UreG_dom 84 269
No external refs found!