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  5. Sopen08g024910

Sopen08g024910


Description : AMP-binding enzyme


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g024910
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
143817 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
232017 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi1g31320 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi1g76280 No alias OPC-8:0 CoA ligase1 0.02 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU7Hr1G111130.3 No alias p-coumarate 0.03 Orthogroups_2024-Update
MA_10432069g0020 No alias (at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00017730-RA No alias (at1g20510 : 538.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.06 Orthogroups_2024-Update
PSME_00022472-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00027793-RA No alias (at1g20510 : 296.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.02 Orthogroups_2024-Update
Seita.6G093400.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Seita.9G537100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G089900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Solyc07g008360 No alias ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 71 476
IPR025110 AMP-bd_C 486 560
No external refs found!