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  5. Sopen08g025340

Sopen08g025340


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g025340
Cluster HCCA clusters: Cluster_410

Target Alias Description ECC score Gene Family Method Actions
At5g53210 No alias SPCH [Source:UniProtKB/TrEMBL;Acc:A0A178UF96] 0.04 Orthogroups_2024-Update
Brara.I04279.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G095500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G129100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Solyc01g080050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 116 167
No external refs found!