Sopen08g025360

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0009831 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009831_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g025360
Cluster	HCCA clusters: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Glyma.01G017400	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.05	Orthogroups_2024-Update
Glyma.09G205500	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
Solyc08g076840	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD...	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	189	259
IPR000504	RRM_dom	92	161

External Links

No external refs found!