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  5. Sopen08g025370

Sopen08g025370


Description : Tetraspanin family


Gene families : OG_42_0002145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g025370
Cluster HCCA clusters: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
A4A49_38687 No alias tetraspanin-2 0.03 Orthogroups_2024-Update
At5g46700 No alias TRN2 [Source:UniProtKB/TrEMBL;Acc:A0A178ULL6] 0.02 Orthogroups_2024-Update
Brara.F03607.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04728.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_485622g0010 No alias (at5g46700 : 228.0) Encodes a transmembrane protein of... 0.03 Orthogroups_2024-Update
PSME_00054550-RA No alias (at5g46700 : 291.0) Encodes a transmembrane protein of... 0.04 Orthogroups_2024-Update
Solyc08g076850 No alias Tetraspanin family protein (AHRD V3.3 *** AT5G46700.1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 2 235
No external refs found!