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  5. Sopen08g025640

Sopen08g025640


Description : LSD1 zinc finger


Gene families : OG_42_0001639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g025640
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
At1g32540 No alias lsd one like 1 [Source:TAIR;Acc:AT1G32540] 0.05 Orthogroups_2024-Update
Glyma.08G129400 No alias LSD1 zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.17G154800 No alias lsd one like 1 0.02 Orthogroups_2024-Update
LOC_Os08g03610 No alias LSD1 zinc finger domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10436314g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.6G075700.1 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.03 Orthogroups_2024-Update
Seita.9G159900.1 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.02 Orthogroups_2024-Update
Solyc08g077060 No alias Zinc finger, LSD1-type (AHRD V3.3 *** A0A103XQX8_CYNCS) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 29 53
IPR005735 Znf_LSD1 106 130
IPR005735 Znf_LSD1 68 92
No external refs found!